There are some new compatible routes for Hmmsim that I have recently found from creating routes the list is here
A to lefferts blvd
E to World Trade Center
J/Z to Broad St
M to Chambers St
G to Smith 9th St
Q to Brighton Beach or Coney Island
You will need to convert these routes with the bve to hmmsim converter . It's best to use the train that is compatible with each route when converting the routes but you can use any trainset you want